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Determination of T-cell clonality and expression profiles of Toll-like receptors signaling pathway genes and related miRNAs in patients with mycosis fungoides

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dc.contributor.author Secme, Mucahit
dc.contributor.author Dodurga, Yavuz
dc.contributor.author Demirkan, Nese Calli
dc.contributor.author Kacar, Nida
dc.contributor.author Gunel, Nur Selvi
dc.contributor.author Acikbas, Ibrahim
dc.date.accessioned 2024-03-26T06:42:44Z
dc.date.available 2024-03-26T06:42:44Z
dc.date.issued 2024
dc.identifier.citation Seçme, M., Dodurga, Y., Demirkan, NÇ., Kaçar, N., Günel, NS., Açikbas, I. (2024). Determination of T-cell clonality and expression profiles of Toll-like receptors signaling pathway genes and related miRNAs in patients with mycosis fungoides. Gene, 891. https://doi.org/10.1016/j.gene.2023.147825 en_US
dc.identifier.issn 0378-1119
dc.identifier.issn 1879-0038
dc.identifier.uri http://dx.doi.org/10.1016/j.gene.2023.147825
dc.identifier.uri https://www.webofscience.com/wos/woscc/full-record/WOS:001084155300001
dc.identifier.uri http://earsiv.odu.edu.tr:8080/xmlui/handle/11489/5163
dc.description WoS Categories: Genetics & Heredity en_US
dc.description Web of Science Index: Science Citation Index Expanded (SCI-EXPANDED) en_US
dc.description Research Areas: Genetics & Heredity en_US
dc.description.abstract Cutaneous T-cell lymphomas (CTCL) encompass a group of diseases characterized by the presence of malignant clonal CD4+ T lymphocytes in the skin. Mycosis fungoides (MF) is the most prevalent form of CTCL, accounting for approximately 60 % of cutaneous T-cell lymphomas and 50 % of all primary cutaneous lymphomas. Despite ongoing research, the precise pathogenesis of MF remains incompletely understood. Toll-like receptors (TLRs) have the ability to specifically recognize ligands, subsequently induce the expression of diverse genes and activate innate immunity within the cell. Furthermore, miRNAs play a crucial role in regulating various aspects of immune cell function. The aim of our study was to explore the potential roles of TLRs and the genes implicated in their signal transduction, along with the expression status of miRNAs in the mechanisms underlying MF. Additionally, we assessed the clonal status and compared it with clinicopathological data using a T-cell clonality assay. To determine the expression status of TLR pathway genes and miRNAs, we conducted RT-PCR analysis on 52 MF samples and 50 control paraffin block materials. Pathway analysis were conducted using the KEGG database. T-cell receptor (TCR) gamma clonality changes were evaluated. Results from the study revealed increased expressions of TLR-1,-4,-8, IRF7, TRAF3, MEK1, MEK2, Elk1, NFkB, hsa-miR-21-5p, and hsa-miR-155-5p, as well as decreased expressions of hsa-miR-130a-3p, hsa-miR-210-3p, and hsa-let-7e-5p in the MF group. TCR gamma clonal change analysis demonstrated that 55.5 % of the analysed DNAs exhibited monoclonal and biallelic patterns, while 45.5 % displayed polyclonality. These findings collectively suggest the potential influ-ence and therapeutic possibilities of the TLR signalling pathway in the molecular pathogenesis of MF. en_US
dc.description.sponsorship Scientific Research Coordinatorship of Pamukkale University [2018SABE004] en_US
dc.language.iso eng en_US
dc.publisher ELSEVIER-AMSTERDAM en_US
dc.relation.isversionof 10.1016/j.gene.2023.147825 en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Mycosis fungoides, Toll -like receptors, miRNAs, Clonality en_US
dc.subject POLYMERASE-CHAIN-REACTION, NF-KAPPA-B, MICRORNA EXPRESSION, DIAGNOSIS, LYMPHOMA, RESISTANCE en_US
dc.title Determination of T-cell clonality and expression profiles of Toll-like receptors signaling pathway genes and related miRNAs in patients with mycosis fungoides en_US
dc.type article en_US
dc.relation.journal GENE en_US
dc.contributor.department Ordu Üniversitesi en_US
dc.identifier.volume 891 en_US


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