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An efficient new method of ytterbium(III) triflate catalysis approach to the synthesis of substituted pyrroles: DFT, ADMET, and molecular docking investigations

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dc.contributor.author Serdaroglu, Goncagul
dc.contributor.author Uludag, Nesimi
dc.contributor.author Ustun, Elvan
dc.date.accessioned 2024-03-25T06:14:51Z
dc.date.available 2024-03-25T06:14:51Z
dc.date.issued 2023
dc.identifier.citation Serdaroglu, G., Uludag, N., Üstün, E. (2023). An efficient new method of ytterbium(III) triflate catalysis approach to the synthesis of substituted pyrroles: DFT, ADMET, and molecular docking investigations. Comput. Biol. Chem., 106. https://doi.org/10.1016/j.compbiolchem.2023.107930 en_US
dc.identifier.issn 1476-9271
dc.identifier.issn 1476-928X
dc.identifier.uri http://dx.doi.org/10.1016/j.compbiolchem.2023.107930
dc.identifier.uri https://www.webofscience.com/wos/woscc/full-record/WOS:001052708800001
dc.identifier.uri http://earsiv.odu.edu.tr:8080/xmlui/handle/11489/4922
dc.description WoS Categories: Biology; Computer Science, Interdisciplinary Applications en_US
dc.description Web of Science Index: Science Citation Index Expanded (SCI-EXPANDED) en_US
dc.description Research Areas: Life Sciences & Biomedicine - Other Topics; Computer Science en_US
dc.description.abstract In this study, the one-pot synthetic methodology for the preparation of substituted pyrroles with diethyl acetylene-dicarboxylate is reported for the various pyrrole derivatives via the Trifimow synthesis process from oximes. This method also offers the literature as a cyclization pathway using a ytterbium triflate catalyst. Another importance of this study is the use of pyrrole derivatives in pharmaceuticals, biological processes, and agrochemicals. From this point of view, the development of a new catalyst in synthetic organic chemistry and the difference in the method is also important. The syntheses of the target substituted pyrroles are accomplished in high yields. Also, all synthesized structures were confirmed by 1H NMR, 13C NMR, and IR spectra. The DFT computations were leveraged for structural and spectroscopic validation of the compounds. Then, FMO and NBO analyses were subsequently employed to elucidate the reactivity characteristics and intramolecular interactions within these compounds. Also, ADMET indices were ascertained to assess potential pharmacokinetic properties, drug-like qualities, and possible adverse effects of these compounds. Last, optimized molecules were analyzed by molecular docking methods against crystal structures of Bovine Serum Albumin and Leukemia Inhibitory Factor, and their binding affinities, interaction details, and inhibition constants were determined. en_US
dc.description.sponsorship Scientific and Technological Research Council of Turkey (TUBITAK) [112T503] en_US
dc.language.iso eng en_US
dc.publisher ELSEVIER SCI LTD-OXFORD en_US
dc.relation.isversionof 10.1016/j.compbiolchem.2023.107930 en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Ytterbium(III) triflate, Substituted pyrroles, Ketoxime, DFT, Molecular docking en_US
dc.subject DENSITY-FUNCTIONAL THEORY, DRUG DISCOVERY, ORBITAL METHODS, BASIS-SET, SOLUBILITY, PREDICTION, BINDING, BIOAVAILABILITY, IMPLEMENTATION, CYCLOADDITION en_US
dc.title An efficient new method of ytterbium(III) triflate catalysis approach to the synthesis of substituted pyrroles: DFT, ADMET, and molecular docking investigations en_US
dc.type article en_US
dc.relation.journal COMPUTATIONAL BIOLOGY AND CHEMISTRY en_US
dc.contributor.department Ordu Üniversitesi en_US
dc.contributor.authorID 0000-0002-0587-7261 en_US
dc.identifier.volume 106 en_US


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