Please use this identifier to cite or link to this item: http://earsiv.odu.edu.tr:8080/xmlui/handle/11489/4922
Title: An efficient new method of ytterbium(III) triflate catalysis approach to the synthesis of substituted pyrroles: DFT, ADMET, and molecular docking investigations
Authors: Serdaroglu, Goncagul
Uludag, Nesimi
Ustun, Elvan
Ordu Üniversitesi
0000-0002-0587-7261
Keywords: Ytterbium(III) triflate, Substituted pyrroles, Ketoxime, DFT, Molecular docking
DENSITY-FUNCTIONAL THEORY, DRUG DISCOVERY, ORBITAL METHODS, BASIS-SET, SOLUBILITY, PREDICTION, BINDING, BIOAVAILABILITY, IMPLEMENTATION, CYCLOADDITION
Issue Date: 2023
Publisher: ELSEVIER SCI LTD-OXFORD
Citation: Serdaroglu, G., Uludag, N., Üstün, E. (2023). An efficient new method of ytterbium(III) triflate catalysis approach to the synthesis of substituted pyrroles: DFT, ADMET, and molecular docking investigations. Comput. Biol. Chem., 106. https://doi.org/10.1016/j.compbiolchem.2023.107930
Abstract: In this study, the one-pot synthetic methodology for the preparation of substituted pyrroles with diethyl acetylene-dicarboxylate is reported for the various pyrrole derivatives via the Trifimow synthesis process from oximes. This method also offers the literature as a cyclization pathway using a ytterbium triflate catalyst. Another importance of this study is the use of pyrrole derivatives in pharmaceuticals, biological processes, and agrochemicals. From this point of view, the development of a new catalyst in synthetic organic chemistry and the difference in the method is also important. The syntheses of the target substituted pyrroles are accomplished in high yields. Also, all synthesized structures were confirmed by 1H NMR, 13C NMR, and IR spectra. The DFT computations were leveraged for structural and spectroscopic validation of the compounds. Then, FMO and NBO analyses were subsequently employed to elucidate the reactivity characteristics and intramolecular interactions within these compounds. Also, ADMET indices were ascertained to assess potential pharmacokinetic properties, drug-like qualities, and possible adverse effects of these compounds. Last, optimized molecules were analyzed by molecular docking methods against crystal structures of Bovine Serum Albumin and Leukemia Inhibitory Factor, and their binding affinities, interaction details, and inhibition constants were determined.
Description: WoS Categories: Biology; Computer Science, Interdisciplinary Applications
Web of Science Index: Science Citation Index Expanded (SCI-EXPANDED)
Research Areas: Life Sciences & Biomedicine - Other Topics; Computer Science
URI: http://dx.doi.org/10.1016/j.compbiolchem.2023.107930
https://www.webofscience.com/wos/woscc/full-record/WOS:001052708800001
http://earsiv.odu.edu.tr:8080/xmlui/handle/11489/4922
ISSN: 1476-9271
1476-928X
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